CDS

Accession Number TCMCG017C14984
gbkey CDS
Protein Id OMO93333.1
Location join(46335..46522,46921..47014,47223..47362,47628..47702,47848..48005,48114..48214,48507..48572)
GeneID InterPro:IPR000727
Organism Corchorus olitorius
locus_tag COLO4_16966

Protein

Length 273aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01016273.1
Definition hypothetical protein COLO4_16966 [Corchorus olitorius]
Locus_tag COLO4_16966

EGGNOG-MAPPER Annotation

COG_category U
Description Belongs to the syntaxin family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K08488        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04130        [VIEW IN KEGG]
ko04145        [VIEW IN KEGG]
map04130        [VIEW IN KEGG]
map04145        [VIEW IN KEGG]
GOs GO:0000149        [VIEW IN EMBL-EBI]
GO:0000325        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005484        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006906        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009660        [VIEW IN EMBL-EBI]
GO:0009705        [VIEW IN EMBL-EBI]
GO:0009959        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010118        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0022406        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031201        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048278        [VIEW IN EMBL-EBI]
GO:0048284        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0061025        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090174        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0140056        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCTTTCAAGATCTGGAAGCCGGACGGCCATTCGCGTCGAGGAAAAATCTGATCAACGGTAAGCAAGATGCTACGCAAGCAGTGGCTTCTGGCATTTTCCAGATCAACACCGCCGTCTCCACCTTCCAGCGACTTGTCAATACCCTCGGCACTCCTAAGGACACGCCTGAGCTCCGAGAAAAGCTGCATAAAACGAGGCTACATATTGGGCAATTAGTGAAGGATACTTCGGCTAAACTTAAACAAGCTAGTGAAACAGATCACCGTGTTGAAGTTAGTGCAAGCAAAAAGATAACAGATGCGAAACTTGCAAAAGATTTTCAAGCAGTTTTGAAAGAGTTCCAGAAGGCTCAACGGCTTGCAGCTGAAAGAGAAACAGCATACACTCCTTTTGTTCCCCAAGCAGTTCTTCCTTCAAGCTATACAGCCAGTGAGATAGATGTAGGTTCAGATAAAAATGGCGAACAGCGAGCCCTTCTTGTGGAATCAAGAAGGCAAGAGGTCTTGCTATTGGATAATGAGATTGCATTTAATGAGGCTATCATTGAAGAAAGAGAACAAGGAATTCAAGAAATTCAGCAGCAAATTGGTGAGGTGAATGAGATCTTCAAAGATCTTGCTGTGCTAGTTCATGAGCAAGGAACCATAATTGATGACATTGGGACTCATATTGAGAATTCTCAGGCTGCCACTGTACAGGCAAAATCCCATCTTGTGAAAGCTGCAAAGACCCAGAGATCAAATTCTTCTCTGACCTGCTTGCTCCTGGTGATATTTGGAATCGTTCTTCTCATCGTGATCATAGTACTTGCAGCCTGA
Protein:  
MSFQDLEAGRPFASRKNLINGKQDATQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKQASETDHRVEVSASKKITDAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTASEIDVGSDKNGEQRALLVESRRQEVLLLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGTIIDDIGTHIENSQAATVQAKSHLVKAAKTQRSNSSLTCLLLVIFGIVLLIVIIVLAA